A minimal model for explaining the higher ATP production in the Warburg effect

Stefan Schuster, Daniel Boley, Philip Möller, Christoph Kaleta

Research output: Contribution to conferencePaperpeer-review

Abstract

For producing ATP, tumor cells rely on glycolysis leading to lactate to about the same extent as on respiration. Thus, they use a higher fraction of glycolysis than the corresponding healthy cells. This is known as the Warburg effect (named after German biochemist Otto Warburg) and also applies to striated muscle cells, activated lymphocytes and microglia, endothelial cells and several other cell types. This effect is paradoxical at first sight because the ATP yield of glycolysis is much lower than that of respiration. Although a straightforward explanation is that glycolysis allows a higher ATP production rate, the question arises why the cell does not re-allocate protein to the high-yield pathway of respiration. We tackle this question by a minimal model only including three combined reactions. We consider the case where the cell can allocate protein on several enzymes in a varying distribution and model this by a linear programming problem in which not only the rates but also the maximal velocities are variable. Depending on side conditions and on protein costs, this leads to pure respiration, pure glycolysis, and respirofermentation as a mixed flux distribution.

Original languageEnglish (US)
DOIs
StatePublished - 2015
Event2015 German Conference on Bioinformatics, GCB 2015 - Dortmund, Germany
Duration: Sep 27 2015Sep 30 2015

Conference

Conference2015 German Conference on Bioinformatics, GCB 2015
Country/TerritoryGermany
CityDortmund
Period9/27/159/30/15

Bibliographical note

Publisher Copyright:
© 2015 German Conference on Bioinformatics, GCB 2015. All rights reserved.

Keywords

  • ATP-producing pathway
  • Elementary-modes analysis
  • Flux-Balance Analysis
  • Molar yield
  • Respiratory pathway
  • Warburg effect

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