Dynamical Basis of GPCR-G Protein Coupling Selectivity and Promiscuity

Nagarajan Vaidehi, Fredrik Sadler, Sivaraj Sivaramakrishnan

Research output: Chapter in Book/Report/Conference proceedingChapter

Abstract

Agonist bound G-protein-coupled receptors (GPCRs) get activated and couple either selectively or promiscuously to one or multiple members of the G-proteins in the cell. The challenge in designing ligands that are signaling pathway specific (also known as biased or selective ligands) is to uncover the mechanism by which GPCRs couple to different G proteins. The structural dynamics of the GPCR:G protein complexes and the spatiotemporal determinants of the interface play an important role in understanding the determinants of the selectivity or promiscuous coupling. In this chapter we provide an overview of the current understanding of GPCR:G protein selectivity determinants from both kinetic and thermodynamic aspects of the coupling process. Using a confluence of spectroscopic techniques and molecular dynamics simulations we show that GPCRs exhibits a high degree of structural plasticity characterized by latent G-protein binding cavities, each of which is specific for coupling a distinct G-protein.

Original languageEnglish (US)
Title of host publicationGPCRs as Therapeutic Targets
PublisherWiley
Pages373-387
Number of pages15
Volume1
ISBN (Electronic)9781119564782
ISBN (Print)9781119564744
DOIs
StatePublished - Jan 1 2021

Bibliographical note

Publisher Copyright:
© 2023 by John Wiley and Sons, Inc.

Keywords

  • agonist efficacy
  • allosteric communication
  • Bioluminescence Resonance Energy Transfer
  • Double Electron Energy Resonance
  • Fluorescence Resonance Energy Transfer
  • G protein coupled receptors
  • G protein coupling promiscuity
  • molecular dynamics simulation
  • nuclear magnetic resonance
  • receptor-G protein

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