Orientation refinement of virus structures with unknown symmetry

Yongchang Ji; Dan C. Marinescu; Wei Zhang; Timothy S. Baker

doi:10.1109/IPDPS.2003.1213138

Orientation refinement of virus structures with unknown symmetry

Yongchang Ji, Dan C. Marinescu, Wei Zhang, Timothy S. Baker

Diagnostic and Biological Sciences

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

14 Scopus citations

Abstract

Structural biology, in particular the structure determination of viruses and other large macromolecular complexes lead to data- and compute-intensive problems that require resources well beyond those available on a single system. Thus, there is an imperative need to develop parallel algorithms and programs for clusters and computational grids. We present one of the most challenging computational problems posed by the three-dimensional structure determination of viruses, the orientation refinement.

Original language	English (US)
Title of host publication	Proceedings - International Parallel and Distributed Processing Symposium, IPDPS 2003
Publisher	Institute of Electrical and Electronics Engineers Inc.
Pages	8-15
Number of pages	8
ISBN (Electronic)	0769519261, 9780769519265
DOIs	https://doi.org/10.1109/IPDPS.2003.1213138
State	Published - 2003
Event	International Parallel and Distributed Processing Symposium, IPDPS 2003 - Nice, France Duration: Apr 22 2003 → Apr 26 2003

Publication series

Name	Proceedings - International Parallel and Distributed Processing Symposium, IPDPS 2003

Other

Other	International Parallel and Distributed Processing Symposium, IPDPS 2003
Country/Territory	France
City	Nice
Period	4/22/03 → 4/26/03

Bibliographical note

Publisher Copyright:
© 2003 IEEE.

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10.1109/IPDPS.2003.1213138

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Ji, Y., Marinescu, D. C., Zhang, W., & Baker, T. S. (2003). Orientation refinement of virus structures with unknown symmetry. In Proceedings - International Parallel and Distributed Processing Symposium, IPDPS 2003 (pp. 8-15). Article 1213138 (Proceedings - International Parallel and Distributed Processing Symposium, IPDPS 2003). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/IPDPS.2003.1213138

Orientation refinement of virus structures with unknown symmetry. / Ji, Yongchang; Marinescu, Dan C.; Zhang, Wei et al.
Proceedings - International Parallel and Distributed Processing Symposium, IPDPS 2003. Institute of Electrical and Electronics Engineers Inc., 2003. p. 8-15 1213138 (Proceedings - International Parallel and Distributed Processing Symposium, IPDPS 2003).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Ji, Y, Marinescu, DC, Zhang, W & Baker, TS 2003, Orientation refinement of virus structures with unknown symmetry. in Proceedings - International Parallel and Distributed Processing Symposium, IPDPS 2003., 1213138, Proceedings - International Parallel and Distributed Processing Symposium, IPDPS 2003, Institute of Electrical and Electronics Engineers Inc., pp. 8-15, International Parallel and Distributed Processing Symposium, IPDPS 2003, Nice, France, 4/22/03. https://doi.org/10.1109/IPDPS.2003.1213138

Ji Y, Marinescu DC, Zhang W, Baker TS. Orientation refinement of virus structures with unknown symmetry. In Proceedings - International Parallel and Distributed Processing Symposium, IPDPS 2003. Institute of Electrical and Electronics Engineers Inc. 2003. p. 8-15. 1213138. (Proceedings - International Parallel and Distributed Processing Symposium, IPDPS 2003). doi: 10.1109/IPDPS.2003.1213138

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Orientation refinement of virus structures with unknown symmetry

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