Rapid detection, complete genome sequencing, and phylogenetic analysis of porcine deltacoronavirus

Douglas Marthaler; Lindsey Raymond; Yin Jiang; Jim Collins; Stephanie A Rossow; Albert Rovira

doi:10.3201/eid2008.140526

Rapid detection, complete genome sequencing, and phylogenetic analysis of porcine deltacoronavirus

Douglas Marthaler, Lindsey Raymond, Yin Jiang, Jim Collins, Stephanie A Rossow, Albert Rovira

Veterinary Population Medicine

Research output: Contribution to journal › Article › peer-review

139 Scopus citations

Abstract

In February 2014, porcine deltacoronavirus (PDCoV) was identified in the United States. We developed a PDCoV real-time reverse transcription PCR that identified PDCoV in 30% of samples tested. Four additional PDCoV genomes from the United States were sequenced; these had ≈99%-100% nt similarity to the other US PDCoV strains.

Original language	English (US)
Pages (from-to)	1347-1350
Number of pages	4
Journal	Emerging infectious diseases
Volume	20
Issue number	8
DOIs	https://doi.org/10.3201/eid2008.140526
State	Published - 2014

Access

10.3201/eid2008.140526

OpenUrl availability

Full text

Cite this

@article{4fa732ce2e474054b95c3a515b9890b0,

title = "Rapid detection, complete genome sequencing, and phylogenetic analysis of porcine deltacoronavirus",

abstract = "In February 2014, porcine deltacoronavirus (PDCoV) was identified in the United States. We developed a PDCoV real-time reverse transcription PCR that identified PDCoV in 30% of samples tested. Four additional PDCoV genomes from the United States were sequenced; these had ≈99%-100% nt similarity to the other US PDCoV strains.",

author = "Douglas Marthaler and Lindsey Raymond and Yin Jiang and Jim Collins and Rossow, {Stephanie A} and Albert Rovira",

year = "2014",

doi = "10.3201/eid2008.140526",

language = "English (US)",

volume = "20",

pages = "1347--1350",

journal = "Emerging infectious diseases",

issn = "1080-6040",

publisher = "Centers for Disease Control and Prevention (CDC)",

number = "8",

}

TY - JOUR

T1 - Rapid detection, complete genome sequencing, and phylogenetic analysis of porcine deltacoronavirus

AU - Marthaler, Douglas

AU - Raymond, Lindsey

AU - Jiang, Yin

AU - Collins, Jim

AU - Rossow, Stephanie A

AU - Rovira, Albert

PY - 2014

Y1 - 2014

N2 - In February 2014, porcine deltacoronavirus (PDCoV) was identified in the United States. We developed a PDCoV real-time reverse transcription PCR that identified PDCoV in 30% of samples tested. Four additional PDCoV genomes from the United States were sequenced; these had ≈99%-100% nt similarity to the other US PDCoV strains.

AB - In February 2014, porcine deltacoronavirus (PDCoV) was identified in the United States. We developed a PDCoV real-time reverse transcription PCR that identified PDCoV in 30% of samples tested. Four additional PDCoV genomes from the United States were sequenced; these had ≈99%-100% nt similarity to the other US PDCoV strains.

UR - http://www.scopus.com/inward/record.url?scp=84905278256&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=84905278256&partnerID=8YFLogxK

U2 - 10.3201/eid2008.140526

DO - 10.3201/eid2008.140526

M3 - Article

C2 - 25075556

AN - SCOPUS:84905278256

SN - 1080-6040

VL - 20

SP - 1347

EP - 1350

JO - Emerging infectious diseases

JF - Emerging infectious diseases

IS - 8

ER -

Rapid detection, complete genome sequencing, and phylogenetic analysis of porcine deltacoronavirus

Abstract

Access

OpenUrl availability

Other files and links

Fingerprint

Cite this