TY - JOUR
T1 - Retraction Note
T2 - Evolution of substrate-specific gene expression and RNA editing in brown rot wood-decaying fungi
AU - Wu, Baojun
AU - Gaskell, Jill
AU - Zhang, Jiwei
AU - Toapanta, Christina
AU - Ahrendt, Steven
AU - Grigoriev, Igor V.
AU - Blanchette, Robert A.
AU - Schilling, Jonathan S.
AU - Master, Emma
AU - Cullen, Daniel
AU - Hibbett, David S.
PY - 2022/1
Y1 - 2022/1
N2 - In the article, we, the authors, reported (1). differential gene expression and (2) RNA editing by five species of wood-decaying basidiomycetes. After publication, we discovered that the RNA editing results are artifactual, because we mapped RNAseq reads only to the assembled reference genome, rather than mapping both RNAseq reads and unassembled genomic DNA reads to the assembled reference genome. For this reason, we retract the article. A technical note describing the source of the artifact has been published in ISME Communications [1]. The gene expression results reported are not affected. All authors have agreed to this retraction.
AB - In the article, we, the authors, reported (1). differential gene expression and (2) RNA editing by five species of wood-decaying basidiomycetes. After publication, we discovered that the RNA editing results are artifactual, because we mapped RNAseq reads only to the assembled reference genome, rather than mapping both RNAseq reads and unassembled genomic DNA reads to the assembled reference genome. For this reason, we retract the article. A technical note describing the source of the artifact has been published in ISME Communications [1]. The gene expression results reported are not affected. All authors have agreed to this retraction.
UR - http://www.scopus.com/inward/record.url?scp=85120654338&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85120654338&partnerID=8YFLogxK
U2 - 10.1038/s41396-021-01156-w
DO - 10.1038/s41396-021-01156-w
M3 - Comment/debate
C2 - 34853476
AN - SCOPUS:85120654338
SN - 1751-7362
VL - 16
SP - 322
JO - ISME Journal
JF - ISME Journal
IS - 1
ER -